GENOTYPING OF ECHINOCOCCUS GRANULOSUS ISOLATES
BİLGİLENDİRİLMİŞ OLUR FORMU
Bu katıldığınız çalışma bilimsel bir araştırma olup, araştırmanın adı ‘‘Echinococcus
granulosus izolatlarının genotiplendirilmesi’’dir.
Bu araştırmanın amacı, çeşitli büyükbaş ve küçükbaş memeli hayvanlarda (koyun, keçi, sığır vs.) ve insanlardaki hidatik kist materyalini kullanarak Echinococcus granulosus türünün suş ayrımını ve dağılımını moleküler biyolojik teknikler kullanarak göstermektir. Böylece bölgemizde kist hidatik hastalığına karşı etkin kontrol programları uygulanabilecek,
E. granulosus parazitine karşı aşı, tanı için yöntem ve etkili ilaçlar geliştirilebilecektir.
Bu araştırmada size hekiminiz tarafından uygulanan tedavi dışında herhangi bir tedavi ya da girişim uygulanmayacaktır. Bu araştırmada yer aldığınız takdirde hekiminizin öngördüğü tedavi süresi dışında herhangi bir süre gerekli olmayacaktır. Araştırmada yer alacak gönüllülerin sayısı yaklaşık 50 kişidir.
Bu araştırma ile ilgili olarak herhangi bir sorumluluğunuz bulunmamaktadır. Bu araştırmada sizin için herhangi bir risk ya da yarar bulunmamaktadır. Bu araştırmada size alternatif bir tedavi ya da işlem uygulanmayacaktır.
Araştırma sırasında sizi ilgilendirebilecek herhangi bir gelişme olduğunda, bu durum size veya yasal temsilcinize derhal bildirilecektir. Araştırma hakkında ek bilgiler almak için ya da çalışma ile ilgili herhangi bir sorun, istenmeyen etki ya da diğer rahatsızlıklarınız için 02842357641 - 1625 no.lu telefondan Dr.Canan Eryıldız’a başvurabilirsiniz.
Bu araştırmada yer almanız nedeniyle size hiçbir ödeme yapılmayacaktır. Ayrıca, bu araştırma kapsamındaki bütün muayene, tetkik, testler ve tıbbi bakım hizmetleri için sizden veya bağlı bulunduğunuz sosyal güvenlik kuruluşundan hiçbir ücret istenmeyecektir. Bu araştırma Trakya Üniversitesi Bilimsel Araştırma Projeleri tarafından desteklenmektedir. Bu araştırmada yer almak tamamen sizin isteğinize bağlıdır. Araştırmada yer almayı reddedebilirsiniz ya da herhangi bir aşamada araştırmadan ayrılabilirsiniz; bu durum herhangi bir cezaya ya da sizin yararlarınıza engel duruma yol açmayacaktır. Araştırmanın sonuçları bilimsel amaçla kullanılacaktır; çalışmadan çekilmeniz ya da araştırıcı tarafından çıkarılmanız durumunda, sizle ilgili tıbbi veriler de gerekirse bilimsel amaçla kullanılabilecektir.
Size ait tüm tıbbi ve kimlik bilgileriniz gizli tutulacaktır ve araştırma yayınlansa bile kimlik bilgileriniz verilmeyecektir, ancak araştırmanın izleyicileri, yoklama yapanlar, etik kurullar ve resmi makamlar gerektiğinde tıbbi bilgilerinize ulaşabilir. Siz de istediğinizde kendinize ait tıbbi bilgilere ulaşabilirsiniz.
Çalışmaya Katılma Onayı:
Yukarıda yer alan ve araştırmaya başlanmadan önce gönüllüye verilmesi gereken bilgileri okudum ve sözlü olarak dinledim. Aklıma gelen tüm soruları araştırıcıya sordum, yazılı ve sözlü olarak bana yapılan tüm açıklamaları ayrıntılarıyla anlamış bulunmaktayım. Çalışmaya katılmayı isteyip istemediğime karar vermem için bana yeterli zaman tanındı. Bu koşullar altında, bana ait tıbbi bilgilerin gözden geçirilmesi, transfer edilmesi ve işlenmesi konusunda araştırma yürütücüsüne yetki veriyor ve söz konusu araştırmaya ilişkin bana yapılan katılım davetini hiçbir zorlama ve baskı olmaksızın büyük bir gönüllülük içerisinde kabul ediyorum.
EK-4
Echinococcus granulosus isolate edr10 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial
GenBank: HQ703429.1
FASTA Graphics
Go to:FeaturesSequence
LOCUS HQ703429 366 bp DNA linear INV 26-DEC-2010 DEFINITION Echinococcus granulosus isolate edr10 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial.
ACCESSION HQ703429
VERSION HQ703429.1 GI:315306151 KEYWORDS .
SOURCE mitochondrion Echinococcus granulosus ORGANISM Echinococcus granulosus
Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.
REFERENCE 1 (bases 1 to 366) AUTHORS Eryildiz,C. and Sakru,N.
TITLE Genotyping of Echinococcus granulosus isolates JOURNAL Unpublished
REFERENCE 2 (bases 1 to 366) AUTHORS Eryildiz,C. and Sakru,N. TITLE Direct Submission
JOURNAL Submitted (14-DEC-2010) Medical Microbiology, Trakya University Medical School, Gullapoglu, Edirne, Edirne 22030, Turkey
FEATURES Location/Qualifiers source 1..366 /organism="Echinococcus granulosus" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="edr10" /host="Homo sapiens" /db_xref="taxon:6210" gene <1..>366 /gene="CO1" CDS <1..>366 /gene="CO1" /codon_start=1 /transl_table=9
/product="cytochrome oxidase subunit I" /protein_id="ADU03883.1" /db_xref="GI:315306152" /translation="PGFGIISHICLSISANFDAFGFYGLLFAMFSIVCLGSSVWGHHM FTVGLDVKTAVFFSSVTMIIGVPTGIKVFTWLYMLLNSSVNVSDPVLWWVVSFIVLFT FGGVTGIVLSACVLDNILHD" ORIGIN
1 cctggatttg gtataattag tcatatttgt ttgagtatta gtgctaattt tgatgcgttt 61 gggttctatg ggttgttgtt tgctatgttt tctatagtgt gtttgggcag cagggtttgg 121 ggtcatcata tgtttactgt tgggttggat gtgaagacgg ctgttttttt tagctctgtt 181 actatgatta taggggttcc tactggtata aaggtgttta cttggttata tatgttgttg 241 aattcgagtg ttaatgttag tgatccggtt ttgtgatggg ttgtttcttt tatagtgttg 301 tttacgtttg ggggagttac gggtatagtt ttgtctgctt gtgtgttaga taatattttg 361 catgat
EK-5
Echinococcus granulosus isolate edr1 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial
GenBank: HQ717148.1
FASTA Graphics
Go to:FeaturesSequence
LOCUS HQ717148 366 bp DNA linear INV 26-DEC-2010 DEFINITION Echinococcus granulosus isolate edr1 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial.
ACCESSION HQ717148
VERSION HQ717148.1 GI:315306153 KEYWORDS .
SOURCE mitochondrion Echinococcus granulosus ORGANISM Echinococcus granulosus
Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.
REFERENCE 1 (bases 1 to 366) AUTHORS Eryildiz,C.
TITLE Genotyping of Echinococcus granulosus isolates JOURNAL Unpublished
REFERENCE 2 (bases 1 to 366) AUTHORS Eryildiz,C.
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2010) Medical Microbiology, Trakya University Medical School, Gullapoglu, Edirne, Edirne 22030, Turkey
FEATURES Location/Qualifiers source 1..366 /organism="Echinococcus granulosus" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="edr1" /host="Homo sapiens" /db_xref="taxon:6210" gene <1..>366 /gene="CO1" CDS <1..>366 /gene="CO1" /codon_start=1 /transl_table=9
/product="cytochrome oxidase subunit I" /protein_id="ADU03884.1" /db_xref="GI:315306154" /translation="PGFGIISHICLSISANFDVFGFYGLLFAMFSIVCLGSSVWGHHM FTVGLDVKTAVFFSSVTMIIGVPTGIKVFTWLYMLLNSSVNVSDPVLWWVVSFIVLFT FGGVTGIVLSACVLDNILHD" ORIGIN
1 cctggatttg gtataattag tcatatttgt ttgagtatta gtgctaattt tgatgtgttt 61 gggttctatg ggttgttgtt tgctatgttt tctatagtgt gtttgggtag cagggtttgg 121 ggtcatcata tgtttactgt tgggttggat gtgaagacgg ctgttttttt tagctctgtt 181 actatgatta taggggttcc tactggtata aaggtgttta cttggttata tatgttgttg 241 aattcgagtg ttaatgttag tgatccggtt ttgtgatggg ttgtttcttt tatagtgttg 301 tttacgtttg ggggagttac gggtatagtt ttgtctgctt gtgtgttaga taatattttg 361 catgat
EK-6
Echinococcus granulosus isolate edr2 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial
GenBank: HQ717149.1
FASTA Graphics
Go to:FeaturesSequence
LOCUS HQ717149 366 bp DNA linear INV 26-DEC-2010 DEFINITION Echinococcus granulosus isolate edr2 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial.
ACCESSION HQ717149
VERSION HQ717149.1 GI:315306155 KEYWORDS .
SOURCE mitochondrion Echinococcus granulosus ORGANISM Echinococcus granulosus
Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.
REFERENCE 1 (bases 1 to 366) AUTHORS Eryildiz,C.
TITLE Genotyping of Echinococcus granulosus isolates JOURNAL Unpublished
REFERENCE 2 (bases 1 to 366) AUTHORS Eryildiz,C.
TITLE Direct Submission
JOURNAL Submitted (15-DEC-2010) Medical Microbiology, Trakya University Medical School, Gullapoglu, Edirne, Edirne 22030, Turkey
FEATURES Location/Qualifiers source 1..366 /organism="Echinococcus granulosus" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="edr2" /host="sheep" /db_xref="taxon:6210" gene <1..>366 /gene="CO1" CDS <1..>366 /gene="CO1" /codon_start=1 /transl_table=9
/product="cytochrome oxidase subunit I" /protein_id="ADU03885.1" /db_xref="GI:315306156" /translation="PGFGIISHICLSISANFDAFGFYGLLFAMFSIVCLGSSVWGHHM FTVGLDVKTAVFFSSVTMIIGVPTGIKVFTWLYMLLNSSVNVSDPVLWWVVSFIVLFT FGGVTGIVLSACVLDNILHD" ORIGIN
1 cctggatttg gtataattag tcatatttgt ttgagtatta gtgctaattt tgatgcgttt 61 gggttttatg ggttgttgtt tgctatgttt tctatagtgt gtttgggtag cagggtttgg 121 ggtcatcata tgtttactgt tgggttggat gtgaagacgg ctgttttttt tagctctgtt 181 actatgatta taggggttcc tactggtata aaggtgttta cttggttata tatgttgttg 241 aattcgagtg ttaatgttag tgatccggtt ttgtgatggg ttgtttcttt tatagtgttg 301 tttacatttg ggggagttac gggtatagtt ttgtctgctt gtgtgttaga taatattttg 361 catgat
EK-7
Echinococcus granulosus isolate edr3 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial
GenBank: HQ717150.1
FASTA Graphics
Go to:FeaturesSequence
LOCUS HQ717150 366 bp DNA linear INV 26-DEC-2010 DEFINITION Echinococcus granulosus isolate edr3 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial.
ACCESSION HQ717150
VERSION HQ717150.1 GI:315306157 KEYWORDS .
SOURCE mitochondrion Echinococcus granulosus ORGANISM Echinococcus granulosus
Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.
REFERENCE 1 (bases 1 to 366) AUTHORS Eryildiz,C. and Sakru,N.
TITLE Genotyping of Echinococcus granulosus isolates JOURNAL Unpublished
REFERENCE 2 (bases 1 to 366) AUTHORS Eryildiz,C. and Sakru,N. TITLE Direct Submission
JOURNAL Submitted (15-DEC-2010) Medical Microbiology, Trakya University Medical School, Gullapoglu, Edirne, Edirne 22030, Turkey
FEATURES Location/Qualifiers source 1..366 /organism="Echinococcus granulosus" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="edr3" /host="cattle" /db_xref="taxon:6210" gene <1..>366 /gene="CO1" CDS <1..>366 /gene="CO1" /codon_start=1 /transl_table=9
/product="cytochrome oxidase subunit I" /protein_id="ADU03886.1" /db_xref="GI:315306158" /translation="PGFGIISHICLSISANFDAFGFYGLLFAMFSIVCLGSSVWGHHM FTVGLDVKTAVFFSSVTMIIGVPTGIKVFTWLYMLLNSSVNVSDPVLWWVVSFIVLFT FGGVTGIVLSACVLDNILHD" ORIGIN
1 cctggatttg gtataattag tcatatttgt ttgagtatta gtgctaattt tgatgcgttt 61 gggttctatg ggttgttgtt tgctatgttt tctatagtgt gtttgggtag cagggtttgg 121 ggtcatcata tgtttactgt tgggttggat gtgaagacgg ctgttttttt tagctctgtt 181 actatgatta taggggttcc tactggtata aaggtgttta cttggttata tatgttgttg 241 aattcgagtg ttaatgttag tgatccggtt ttgtgatggg ttgtttcttt tatagtgttg 301 tttacgtttg ggggagttac gggtatagtt ttgtctgctt gtgtgttaga taatattttg 361 catgat
EK-8
Echinococcus granulosus isolate edr4 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial
GenBank: HQ717151.1
FASTA Graphics
Go to:FeaturesSequence
LOCUS HQ717151 369 bp DNA linear INV 26-DEC-2010 DEFINITION Echinococcus granulosus isolate edr4 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial.
ACCESSION HQ717151
VERSION HQ717151.1 GI:315306143 KEYWORDS .
SOURCE mitochondrion Echinococcus granulosus ORGANISM Echinococcus granulosus
Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.
REFERENCE 1 (bases 1 to 369) AUTHORS Eryildiz,C. and Sakru,N.
TITLE Genotyping of Echinococcus granulosus isolates JOURNAL Unpublished
REFERENCE 2 (bases 1 to 369) AUTHORS Eryildiz,C. and Sakru,N. TITLE Direct Submission
JOURNAL Submitted (15-DEC-2010) Medical Microbiology, Trakya University Medical School, Gullapoglu, Edirne, Edirne 22030, Turkey
FEATURES Location/Qualifiers source 1..369 /organism="Echinococcus granulosus" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="edr4" /host="cattle" /db_xref="taxon:6210" gene <1..>369 /gene="ND1" CDS <1..>369 /gene="ND1" /codon_start=1 /transl_table=9
/product="NADH dehydrogenase subunit 1" /protein_id="ADU03879.1" /db_xref="GI:315306144" /translation="LFGVVLLMALVIVYSFIYGSYYSASYSGLSVLWFLAAASTSSYS LLCTGWGGYNNYSFLSSVRCAFGSVSFEACFMCVVIFCALCSCSYNLIDFYYNCWLSL LLFPLIYVLFLICILCETNRT" ORIGIN
1 ttgtttggtg ttgtgttatt aatggctttg gtgattgttt attcatttat ttatggtaga 61 tattatagag ctagttatag aggcctctcc gtgttgtggt ttttggctgc cgccagaaca 121 tctaggtatt ctttgttgtg tactggttgg ggtggttaca acaattattc atttttaagg 181 tcggttcgat gtgcttttgg atctgttagg tttgaggctt gttttatgtg tgtggtgatt 241 ttttgtgctt tgtgtagttg taggtataat ttaattgatt tttattataa ttgttgatta 301 agtttgttat tatttccatt aatttatgtg ttatttttaa tatgtatatt gtgtgaaact 361 aatcgtacg
EK-9
Echinococcus granulosus isolate edr5 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial
GenBank: HQ717152.1
FASTA Graphics
Go to:FeaturesSequence
LOCUS HQ717152 369 bp DNA linear INV 26-DEC-2010 DEFINITION Echinococcus granulosus isolate edr5 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial.
ACCESSION HQ717152
VERSION HQ717152.1 GI:315306145 KEYWORDS .
SOURCE mitochondrion Echinococcus granulosus ORGANISM Echinococcus granulosus
Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.
REFERENCE 1 (bases 1 to 369) AUTHORS Eryildiz,C. and Sakru,N.
TITLE Genotyping of Echinococcus granulosus isolates JOURNAL Unpublished
REFERENCE 2 (bases 1 to 369) AUTHORS Eryildiz,C. and Sakru,N. TITLE Direct Submission
JOURNAL Submitted (15-DEC-2010) Medical Microbiology, Trakya University Medical School, Gullapoglu, Edirne, Edirne 22030, Turkey
FEATURES Location/Qualifiers source 1..369 /organism="Echinococcus granulosus" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="edr5" /host="Homo sapiens" /db_xref="taxon:6210" gene <1..>369 /gene="ND1" CDS <1..>369 /gene="ND1" /codon_start=1 /transl_table=9
/product="NADH dehydrogenase subunit 1" /protein_id="ADU03880.1" /db_xref="GI:315306146" /translation="LFGVVLLMALVIVYSFIYGSYYSASYSGLSVLWFLAAASTSSYS LLCTGWGGYNNYSFLSSVRCAFGSVSFEACFMCVVIFCALCSCSYNLIDFYYNCWLSL LLFPLIYVLFLICILCETNRT" ORIGIN
1 ttgtttggtg ttgtgttatt aatggctttg gtgattgttt attcatttat ttatggtaga 61 tattatagag ctagttatag aggcctctcc gtgttgtggt ttttggctgc cgccagaaca 121 tctaggtatt ctttgttgtg tactggttgg ggtggttaca acaattattc atttttaagg 181 tcggttcgat gtgcttttgg atctgttagg tttgaggctt gttttatgtg tgtggtgatt 241 ttttgtgctt tgtgtagttg taggtataat ttaattgatt tttattacaa ttgttgatta 301 agtttgttat tatttccatt aatttatgtg ttatttttaa tatgtatatt gtgtgaaact 361 aatcgtacg
EK-10
Echinococcus granulosus isolate edr6 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial
GenBank: HQ717153.1
FASTA Graphics
Go to:FeaturesSequence
LOCUS HQ717153 369 bp DNA linear INV 26-DEC-2010 DEFINITION Echinococcus granulosus isolate edr6 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial.
ACCESSION HQ717153
VERSION HQ717153.1 GI:315306147 KEYWORDS .
SOURCE mitochondrion Echinococcus granulosus ORGANISM Echinococcus granulosus
Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.
REFERENCE 1 (bases 1 to 369) AUTHORS Eryildiz,C. and Sakru,N.
TITLE Genotyping of Echinococcus granulosus isolates JOURNAL Unpublished
REFERENCE 2 (bases 1 to 369) AUTHORS Eryildiz,C. and Sakru,N. TITLE Direct Submission
JOURNAL Submitted (15-DEC-2010) Medical Microbiology, Trakya University Medical School, Gullapoglu, Edirne, Edirne 22030, Turkey
FEATURES Location/Qualifiers source 1..369 /organism="Echinococcus granulosus" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="edr6" /host="Homo sapiens" /db_xref="taxon:6210" gene <1..>369 /gene="ND1" CDS <1..>369 /gene="ND1" /codon_start=1 /transl_table=9
/product="NADH dehydrogenase subunit 1" /protein_id="ADU03881.1" /db_xref="GI:315306148" /translation="LFGVVLLMALVIVYSFIYGSYYSASYSGLSVLWFLAAASTSSYS LLCTGWGGYNNYSFLSSVRCAFGSVSFEACFMCVVIFCALCSCSYNLIDFYYNCWLSL LLFPLIYVLFLICILCETNRT" ORIGIN
1 ttgtttggtg ttgtgttatt aatggctttg gtgattgttt attcatttat ttatggtaga 61 tattatagag ctagttatag aggcctctcc gtgttgtggt ttttggctgc cgccagaaca 121 tctaggtatt ctttgttgtg tactggttgg ggtggttaca acaattattc atttttaagg 181 tcggttcgat gtgcctttgg atctgttagg tttgaggctt gttttatgtg tgtggtgatt 241 ttttgtgctt tgtgtagttg taggtataat ttaattgatt tttattataa ttgttgatta 301 agtttgttat tatttccatt aatttatgtg ttatttttaa tatgtatatt gtgtgaaact 361 aatcgtacg
EK-11
Echinococcus granulosus isolate edr7 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial
GenBank: HQ717154.1
FASTA Graphics
Go to:FeaturesSequence
LOCUS HQ717154 367 bp DNA linear INV 26-DEC-2010 DEFINITION Echinococcus granulosus isolate edr7 NADH dehydrogenase subunit 1 (ND1) gene, partial cds; mitochondrial.
ACCESSION HQ717154
VERSION HQ717154.1 GI:315306149 KEYWORDS .
SOURCE mitochondrion Echinococcus granulosus ORGANISM Echinococcus granulosus
Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.
REFERENCE 1 (bases 1 to 367) AUTHORS Eryildiz,C. and Sakru,N.
TITLE Genotyping of Echinococcus granulosus isolates JOURNAL Unpublished
REFERENCE 2 (bases 1 to 367) AUTHORS Eryildiz,C. and Sakru,N. TITLE Direct Submission
JOURNAL Submitted (15-DEC-2010) Medical Microbiology, Trakya University Medical School, Gullapoglu, Edirne, Edirne 22030, Turkey
FEATURES Location/Qualifiers source 1..367 /organism="Echinococcus granulosus" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="edr7" /host="Homo sapiens" /db_xref="taxon:6210" gene <1..>367 /gene="ND1" CDS <1..>367 /gene="ND1" /codon_start=1 /transl_table=9
/product="NADH dehydrogenase subunit 1" /protein_id="ADU03882.1" /db_xref="GI:315306150" /translation="LFGVLLLIVLVVVYSFIYGSYYSVSYSMLSVLWFLAASSISSYS LLCTGWGSYNSYSFLSSVRCAFGSVSFEACFMCVVIFCALCCCGYNLIDFYYSYWWSW LLFPLIYGLFLVCVLCETNR" ORIGIN
1 ttgtttggtg ttttgttgtt gatagttttg gttgtggtgt attcgtttat ttatggtaga 61 tattatagag ttagttatag tatgctttct gtgttatgat ttttagctgc ttctagaatt 121 tctaggtatt ccttgttgtg tactggttgg ggtagttaca atagttattc ttttttaagg 181 tcggttcgat gtgcttttgg atctgttagg tttgaggctt gttttatgtg tgtggttatt 241 ttttgcgctt tatgctgttg tgggtataat ttaattgatt tttattatag ttactggtga 301 agttgattat tattcccatt aatttatggg ttattcttgg tgtgtgtgtt atgtgagact 361 aatcgta
EK-12
Echinococcus granulosus isolate edr8 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial
GenBank: HQ717155.1
FASTA Graphics
FeaturesSequence
LOCUS HQ717155 366 bp DNA linear INV 26-DEC-2010 DEFINITION Echinococcus granulosus isolate edr8 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial.
ACCESSION HQ717155
VERSION HQ717155.1 GI:315306159 KEYWORDS .
SOURCE mitochondrion Echinococcus granulosus ORGANISM Echinococcus granulosus
Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.
REFERENCE 1 (bases 1 to 366) AUTHORS Eryildiz,C. and Sakru,N.
TITLE Genotyping of Echinococcus granulosus isolates JOURNAL Unpublished
REFERENCE 2 (bases 1 to 366) AUTHORS Eryildiz,C. and Sakru,N. TITLE Direct Submission
JOURNAL Submitted (15-DEC-2010) Medical Microbiology, Trakya University Medical School, Gullapoglu, Edirne, Edirne 22030, Turkey
FEATURES Location/Qualifiers source 1..366 /organism="Echinococcus granulosus" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="edr8" /host="Homo sapiens" /db_xref="taxon:6210" gene <1..>366 /gene="CO1" CDS <1..>366 /gene="CO1" /codon_start=1 /transl_table=9
/product="cytochrome oxidase subunit I" /protein_id="ADU03887.1" /db_xref="GI:315306160" /translation="PGFGVISHICLSISSNLDVFGFYGLLFAMFSIVCLGSSVWGHHM FTVGLDVKTAVFFSSVTMIIGVPTGIKVFTWLYMLLNSNVNASDPVLWWVISFIVLFT FGGVTGIVLSACVLDNVLHD" ORIGIN
1 cccggatttg gtgttattag tcatatttgt ttgaggatta gttctaattt ggatgttttt 61 gggttttatg ggttgttgtt tgctatgttt tctatagtgt gtttaggtag tagtgtttgg 121 ggacatcata tgtttactgt tggattagat gtgaagactg ctgttttttt tagttctgtt 181 actatgatta taggtgttcc tactggtata aaggtgttta cttggttgta tatgttattg 241 aattctaatg ttaatgctag tgatcctgtt ttgtggtggg ttatttcttt tatagtttta 301 tttacgtttg ggggcgtcac tggtatagtt ttgtctgctt gtgtgttgga taatgtttta 361 catgat
EK-13
Echinococcus granulosus isolate edr9 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial
GenBank: HQ717156.1
FASTA Graphics
Go to:FeaturesSequence
LOCUS HQ717156 366 bp DNA linear INV 26-DEC-2010 DEFINITION Echinococcus granulosus isolate edr9 cytochrome oxidase subunit I (CO1) gene, partial cds; mitochondrial.
ACCESSION HQ717156
VERSION HQ717156.1 GI:315306161 KEYWORDS .
SOURCE mitochondrion Echinococcus granulosus ORGANISM Echinococcus granulosus
Eukaryota; Metazoa; Platyhelminthes; Cestoda; Eucestoda; Cyclophyllidea; Taeniidae; Echinococcus.
REFERENCE 1 (bases 1 to 366) AUTHORS Eryildiz,C. and Sakru,N.
TITLE Genotyping of Echinococcus granulosus isolates JOURNAL Unpublished
REFERENCE 2 (bases 1 to 366) AUTHORS Eryildiz,C. and Sakru,N. TITLE Direct Submission
JOURNAL Submitted (15-DEC-2010) Medical Microbiology, Trakya University Medical School, Gullapoglu, Edirne, Edirne 22030, Turkey
FEATURES Location/Qualifiers source 1..366 /organism="Echinococcus granulosus" /organelle="mitochondrion" /mol_type="genomic DNA" /isolate="edr9" /host="cattle" /db_xref="taxon:6210" gene <1..>366 /gene="CO1" CDS <1..>366 /gene="CO1" /codon_start=1 /transl_table=9
/product="cytochrome oxidase subunit I" /protein_id="ADU03888.1" /db_xref="GI:315306162" /translation="PGFGIISHICLSISANFDAFGFYGLLFAMFSIVCLGSSVWGHHM FTVGLDVKTAVFFSSVTMIIGVPTGIKVFTWLYMLLNSSVNVSDPVLWWVVSFIVLFT FGGVTGIVLSACVLDNILHD" ORIGIN
1 cctggatttg gtataattag tcatatttgt ttgagtatta gtgctaattt tgatgcgttt 61 gggttttatg ggttgttgtt tgctatgttt tctatagtgt gtttgggtag cagggtttgg 121 ggtcatcata tgtttactgt tgggttggat gtgaagacgg ctgttttttt tagctctgtt 181 actatgatta taggggttcc tactggtata aaggtgttta cttggttata tatgttgttg 241 aattcgagtg ttaatgttag tgatccggtt ttgtgatggg ttgtttcttt tatagtgttg 301 tttacgtttg ggggagttac gggtatagtt ttgtctgctt gtgtgttaga taatattttg 361 catgat