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Dr. Açelya Yılmazer Carbohydrates

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(1)

Carbohydrates

Dr. Açelya Yılmazer

(2)

Carbohydrates

• Named so because many have formula Cn(H2O)n

• Produced from CO2 and H2O via photosynthesis in plants

• Range from as small as glyceraldehyde (Mw = 90 g/mol) to as large as amylopectin (Mw = 200,000,000 g/mol)

• Fulfill a variety of functions including:

energy source and energy storage

structural component of cell walls and exoskeletons informational molecules in cell-cell signaling

• Often covalently linked with proteins to form glycoproteins and proteoglycans

(3)

Aldoses and Ketoses

An aldose contains an aldehyde functionality

A ketose contains a ketone functionality

(4)

Enantiomers

• Enantiomers: stereoisomers that are non-superimposable mirror images

• In sugars that contain many chiral centers, only the one that is most distant from the carbonyl carbon is designated as D or L

• D and L isomers of a sugar are enantiomers

e.g. L and D glucose have the same water solubility

• Most hexoses in living organisms are D stereoisomers

• Some simple sugars occur in the L-form, such as L- arabinose

(5)

Diastereomers

• Diastereomers: stereoisomers that are not mirror images

• Diastereomers have different physical properties

e.g. water solubilities of threose and erythrose are different

(6)

Drawing Monosaccharides

• Chiral compounds can be drawn using perspective formulas

• However, chiral carbohydrates are usually represented by Fischer projections

• Horizontal bonds are pointing towards you;

vertical bonds are projecting away from you

(7)

Epimers

• Epimers are two sugars that differ only in the

configuration around one carbon atom

(8)

Structures to Know

• Ribose is the standard five-carbon sugar

• Glucose is the standard six-carbon sugar

• Galactose is an epimer of glucose

• Mannose is an epimer of glucose

• Fructose is the ketose form of glucose

(9)

Hemiacetals and Hemiketals

• Aldehyde and ketone carbons are electrophilic

• Alcohol oxygen atom is a nucleophilic

• When aldehydes are attacked by alcohols, hemiacetals form

• When ketones are attacked by alcohols,

hemiketals form

(10)

Cyclization of Monosaccharides

• Pentoses and hexoses readily undergo intramolecular cyclization

• The former carbonyl carbon becomes a new chiral center, called the anomeric carbon

• The former carbonyl oxygen becomes a hydroxyl group; the position of this group determines if the anomer is  or

• If the hydroxyl group is on the opposite side (trans) of the ring as the CH2OH moiety the configuration is 

• In the hydroxyl group is on the same side (cis) of the ring as the CH2OH moiety, the configuration is 

(11)

Pyranoses and Furanoses

• Six-membered oxygen-containing rings are called pyranoses

• Five-membered oxygen-containing ring are called furanoses

• The anomeric carbon is usually drawn on the

right side

(12)

Chain-ring Equilibrium and Reducing Sugars

• The ring forms exist in equilibrium with the open- chain forms

• Aldehyde can reduce Cu

2+

to Cu

+

(Fehling’s test)

• Aldehyde can reduce Ag

+

to Ag

0

(Tollens’ test)

• Allows to detect reducing sugars, such as glucose

(13)

The Glycosidic Bond

• Two sugar molecules can be joined via a

glycosidic bond between an anomeric carbon and a hydroxyl carbon

• The glycosidic bond (an acetal) between

monomers is less reactive than the hemiacetal at the second monomer

• The disaccharide formed upon condensation of

two glucose molecules via 1  4 bond is called

maltose

(14)

Nonreducing disaccharides

• Two sugar molecules can be also joined via a glycosidic bond between two anomeric carbons

• The product has two acetal groups and no hemiacetals

• There is no reducing ends, this is a nonreducing disaccharide

• Trehalose is a constituent of hemolymph of insects

• Provides protection from drying

Resurrection plant (> 15 yrs)

(15)

Polysaccharides

• Natural carbohydrates are usually found as polymers

• These polysaccharides can be – homopolysaccharides

– heteropolysaccharides

• Polysaccharides do not have a defined molecular weight.

– This is in contrast to proteins because unlike proteins, no template is used to make

polysaccharides

(16)

Glycogen

• Glycogen is a branched homopolysaccharide of glucose

– Glucose monomers form (1  4) linked chains – Branch-points with (1  6) linkers every 8-12

residues

– Molecular weight reaches several millions

– Functions as the main storage polysaccharide in

animals

(17)

Starch

• Starch is a mixture of two homopolysaccharides of glucose

• Amylose is unbranched polymer of (1  4) linked residues

• Amylopectin is branched like glycogen but the branch-points with

(1  6) linkers occur every 24-30 residues

• Molecular weight of amylopectin is up to 200 million

• Starch is the main storage homopolysaccharide in

plants

(18)

Metabolism of Glycogen and Starch

• Glycogen and starch often form granules in cells

• Granules contain enzymes that synthesize and degrade these polymers

• Glycogen and amylopectin have one reducing end but many non-reducing ends

• Enzymatic processing occurs simultaneously in

many non-reducing ends

(19)

Cellulose

• Cellulose is a branched homopolysaccharide of glucose

– Glucose monomers form (1  4) linked chains – Hydrogen bonds form between adjacent

monomers

– Additional H-bonds between chains

– Structure is now tough and water-insoluble

– Most abundant polysaccharide in nature

– Cotton is nearly pure fibrous cellulose

(20)

Cellulose Metabolism

• The fibrous structure, and water-insolubility makes cellulose a difficult substrate to act on

• Fungi, bacteria, and protozoa secrete cellulase, which allows them to use wood as source of glucose

• Most animals cannot use cellulose as a fuel source because they lack the enzyme to hydrolyze (1 4) linkages

• Ruminants and termites live symbiotically with a microorganisms that produces cellulase

• Cellulases hold promise in the fermentation of biomass into biofuels

(21)

Chitin

• Chitin is a linear homopolysaccharide of N-acetylglucosamine – N-acetylglucosamine monomers form (1  4) linked

chains

– Forms extended fibers that are similar to those of cellulose – Hard, insoluble, cannot be digested by vertebrates

– Structure is now tough but flexible, and water-insoluble – Found in cell walls in mushrooms, and in exoskeletons of

insects, spiders, crabs, and other arthropods

(22)

Agar and Agarose

• Agar is a complex mixture of

hetereopolysaccharides containing modified galactose units

• Serves as a component of cell wall in some seaweeds

• Agarose is one component of agar:

• Agar solutions form gels that are commonly used in the laboratory as a surface for growing bacteria

• Agarose solutions form gels that are commonly

used in the laboratory for separation DNA by

electrophoresis

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