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The Structure and Organization of Genetic Material in Eukaryotes

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The Structure and Organization of Genetic Material in

Eukaryotes

Asist Prof. Nüket Bilgen

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GENETIC MATERIALS IN MODERN GENETICS DNA (DEOXYRIBONUCLEIC ACID) FORMS THE GENETIC MATERIAL FOR ALMOST ALL

ORGANISMS ON THE PLANET

** THERE IS AN EXCEPTION:

SOME VIRUSES STORES INFORMATION IN RNA

RNA (RIBONUCLEIC ACID) AS THE GENETIC MATERIAL (LEWIN, 1999).

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DO YOU RECOGNIZE

THIS FELLOW??

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Until the 1940s, the proteins or their building blocks “amino acids” forming chromosomes were thought to be the carrier and storage for genetic information that passes from generation to generation

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 Griffith's experiment (1928) – Bacterial Transformation principle"

- There is a hereditary material

 Avery, MacLeod and McCarty experiment (1944) -DNA is the hereditary material – The first evidence

 Hershey and Chase experiment (1952)

-DNA is the hereditary material – The second evidence

Other evidences:

- Somatic cells contain twice amount of DNA in comparison to gametes

- Mutation Experiments

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Griffith 1928 bacterial transformation

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Avery, Macleod ve McCarty 1943

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Hersey and Chase 1952 radioactive

isotopes.

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Genetic Material Must Have Four Characteristics

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1. REPLICATION

2. INFORMATION STORAGE

3. EXPRESSION OF THE STORED İNFORMATİON

4. VARIATION BY MUTATİON

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• Replication of the genetic material is a fundamental property of all living organisms- Cell cycle and cell divisions

• Storage of information requires the molecule to act as a repository regardless of whether expressed or not by the cell- most cells contain a complete copy of the organism’s genome

• Mutations- The genetic material is also the source of diversity among organisms, through the process of mutation.

a change in the chemical composition of DNA Changes in transcription

and translation Changes in proteins

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Central Dogma

Expression of the stored genetic information is a complex process that is the underlying basis for the concept of information flow within the cell

RNA is synthesized from DNA and protein is synthesized from RNA

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Questionare

• Is Central dogma valid?

• -yes

• -no

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(12)

Central dogma is not valid in modern genetics

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1. DNA can also be synthesized from RNA - Reverse Transcription

- Reverse transcription is the transfer of information from RNA to DNA

- retroviruses, such as HIV, as well as in eukaryotes, in the case of retrotransposons and telomere synthesis.

2. The final product of DNA is not necessarily have to be protein.

-Functional RNA molecules (tRNA, siRNA) which are transcribed from DNA but not

translated into proteins.

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• Nucleic acids consist of polynucleotide chains.

• Nucleic acids contain four types of bases,

two purines: adenine (A), guanine (G) and two pyrimidines: cytosine (C) and thymine (T). In RNA thymine is replaced by uracil (U).

Nucleobases

The human genome contains approximately 3 billion of these base pairs!

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DNA chains are complementary and antiparallel

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Watson-Crick DNA Model, B-DNA

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* The physical structure of DNA was discovered by Watson and Crick in 1953.

1959, Boston, Massachusetts, USA:

James Watson and Francis Crick

 Anti-parallel

 a double helical structure- the base pairs are nearly perpendicular to the helix axis

 the double helix is right-handed

 10–10.5 base pairs per turn

 2 nm in diameter

 DNA contains major groove and minor groove.

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Each full turn of the helix is 3.4nm. There are 10 bases in each turn.

The coil has a diameter of 2 nm.

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3 helical forms of DNA

Physiological

cond. Rare.

High salt const.

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Analytical methods used in DNA Research ;

 DNA's ability to absorb UV light,

 Precipitation behavior,

 Denaturation and renaturation feature,

 Electrophoretic properties,

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• DNA organization into chromosomes

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Eukaryotic chromosomes

Kromatit

Kromozom

Kromatit

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SUPERCOIL

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Chromosomal DNA associated proteins

Histon proteins

Nonhiston proteins

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Nucleosome is the basic unit of chromatin.

DNA organization into chromosomes

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Heterochromatin- Euchromatin

• Heterochromatin is dark color

• Euchromatin is

light colored.

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Telomere

- heterochromatin Centromere

- heterochromatin

Genes, repetitive sequences, Replication originations

- mostly euchromatin

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CENTROMERE

Sentromer

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Telomeres

Embriyonik hücre kök

Kromozom

Yetişkin

hücre kök

Telomer

Uzun

telomer Kısa

telomer Telomeraz

aktif Telomeraz

İnaktif/yok

Telomer tekrarlayan

dizisidir DNA

Telomerin boyunun uzaması

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G-band: Giemsa -A:T rich

R-band: “Reverse”

-G:C rich

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RNA TYPES

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OTHER RNA TYPES

• Small nuclear RNA (snRNA)

• Small Nucleolar RNA molecule (snoRNA)

• Micro RNA (miRNA)

• Small interfering RNA (siRNA)

• RNA is a component of telomerase

• Antisense RNA

• tmRNA

• Catalytic RNA

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