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1. Çukurova popülasyonunda 137 (84 kadın ve 53 erkek) örnekle yapılan çalışmada 12 X-STR lokusunda toplam 126 alel tanımlamıştır. En fazla alele sahip lokusun 31 alelli DXS10148 ve en az alele sahip lokusun 5 alelli DXS8378 olduğu gözlendi.

2. Diploid örneklerle yapılan HWE testlerinde; Bonferroni düzeltme testi sonrası gözlenen ve beklenen genotip dağlımları arasında sapma olmamıştır (p> 0.05/12).

3. Lokusların PD değerleri incelendiğinde çalışılan lokuslar içinde en yüksek ayrım gücü kapasitesine sahip lokusun DXS10135 (PD Kadın = 0.995396, PD Erkek = 0.951127) ve en düşük ayrım gücü kapasitesi sahip lokusun DXS8378 (PD Kadın = 0.826910, PD Erkek = 0.669670) olduğu saptanmıştır.

4. 84 kadın ve 53 erkek örnekle yapılan LD testinde; Bonferroni düzeltme faktörü sonrası 12-XSTR lokusu arasında bağlantı saptanmamıştır.

5. 53 haploid örnekte bağlantılı grupların oluşturduğu haplotipler incelendiğinde; a) Bağlantı grubu 1 (DXS8378, DXS10135 ve DXS10148)’de 50 farklı

haplotip,

b) Bağlantı grubu 2( DXS7132, DXS10074 ve DXS10079)’de 46 farklı haplotip,

c) Bağlantı grubu 3 ( HPRTB, DXS10101 ve DXS10103)’te 39 farklı haplotip ve

d) Bağlantı grubu 4 (DXS7423, DXS10134 ve DXS10146)’te 46 farklı haplotip tanımlanmış olup, bağlantılı gruplar için en düşük PD değeri 0.94’ün üzerindedir.

6. Çalışılan 12 –XTR lokusunun adli analizler için etkinliği test edildiğinde yüksek PIC, PD, MEC değerleri ile dört bağlantı grubunun yüksek kümülatif PD değeri (0.999999) nedeniyle, bu markırların adli amaçlı kimliklendirme ve akrabalık ilişkilerinin analizinde ve özellikle bazı kompleks akrabalık ilişkilerinde yüksek etkinliğe sahip olduğunu ortaya koymuştur.

7. Bu çalışma ile oluşturulan veriler Anabilim Dalımız Adli Genetik Laboratuvarı ve diğer Adli Genetik Laboratuvarlarında yapılacak istatistiksel hesaplamalarda

kullanılabilecek; özellikle otozomal STR lokusları ile yeterli ayrım gücüne ulaşılamayan ve/veya babanın yokluğunda babaanne-kız torun ve hala-kız yeğen ilişkisinin ortaya koyulması ile baba olabilirliğin kuvvetlendirilmesi veya dışlanmasında anlamlı olabilecektir.

KAYNAKLAR

1. Butler JM. Fundamentals of Forensic DNA Typing. Fundam. Forensic DNA Typing 2010; doi:10.1016/C2009-0-01945-X.

2. Jiang X, Guo F, Jia F, Jin P & Sun Z. Development of a 20-locus fluorescent multiplex system as a valuable tool for national DNA database. Forensic Sci. Int. Genet. 2013; 7: 279–289.

3. Carracedo A & Sánchez-Diz P. Forensic DNA-typing technologies: a review. Methods Mol. Biol. 2005; 297: 1–12.

4. Hukuku, I.I.I. S. Iii. sağlik hukuku kurultayi 7-8. 2010.

5. Jeffreys AJ, Wilson V & Thein SL. Hypervariable ‘minisatellite’ regions in human DNA. Nature 1985; 314:67–73.

6. Dumache R, Ciocan V, Muresan C & Enache A. Molecular DNA Analysis in Forensic Identification. Clin. Lab. 62, 2016.

7. Hossain T et al. Population genetic data on 15 autosomal STR loci in Bangladeshi population.

Forensic Sci. Int. Genet. 2014; 13:e4–e5.

8. Liu QL et al. Development and population study of the 12 X-STR loci multiplexes PCR systems.

Int. J. Legal Med. 2012; 126: 665–670.

9. Trindade-Filho A, Ferreira S & Oliveira SF. Impact of a chromosome X STR Decaplex in deficiency paternity cases. Genet. Mol. Biol. 2013; 36:507–510.

10. Szibor R et al. Use of X-linked markers for forensic purposes. Int. J. Legal Med. 2003; 117: 67–74. 11. Williams LN. An introduction to forensic genetics. General Dentistry 61, 2013.

12. Tamaki K & Jeffreys AJ. Human tandem repeat sequences in forensic DNA typing. Leg. Med. 2005; 7:244–250.

13. Jeffreys AJ, Wilson V & Thein SL. Individual-specific ‘fingerprints’ of human DNA. Nature 1985; 316:76–79.

14. Litt M & Luty JA. A hypervariable microsatellite revealed by in vitro amplification of a dinucleotide repeat within the cardiac muscle actin gene. Am. J. Hum. Genet. 1989; 44: 397–401.

15. Nakamura Y et al. Variable number of tandem repeat (VNTR) markers for human gene mapping.

Science 1987; 235: 16–22.

16. Kashyap VK, Sitalaximi T, Chattopadhyay P & Trivedi R. DNA Profiling Technologies in Forensic Analysis. Int. J. Hum. Genet. 2004; 4:11–30.

17. Kloosterman AD, Budowle B & Daselaar P. PCR-amplification and detection of the human D1S80 VNTR locus. Amplification conditions, population genetics and application in forensic analysis. Int. J. Legal Med. 1993; 105:257–64.

18. Butler J. Advanced Topics in Forensic DNA Typing: Methodology. (Elsevier). 2012 doi:10.1016/C2011-0-04189-3

19. Saiki R et al. Enzymatic amplification of beta-globin genomic sequences and restriction site analysis for diagnosis of sickle cell anemia. Science (80-. ). 1985; 230: 1350–1354.

20. Edwards A, Civitello A, Hammond HA & Caskey CT. DNA typing and genetic mapping with trimeric and tetrameric tandem repeats. Am. J. Hum. Genet. 1991; 49: 746–56.

21. Kimpton CP et al. Automated DNA profiling employing multiplex amplification of short tandem repeat loci. PCR Methods Appl. 1993; 3: 13–22.

22. Kimpton C et al. Evaluation of an automated DNA profiling system employing multiplex amplification of four tetrameric STR loci. Int. J. Legal Med. 1994; 106: 302–311.

23. Clayton TM, Whitaker JP & Maguire CN. Identification of bodies from the scene of a mass disaster using DNA amplification of short tandem repeat (STR) loci. Forensic Sci. Int. 1995; 76: 7– 15.

24. Hagelberg E, Gray IC & Jeffreys AJ. Identification of the skeletal remains of a murder victim by DNA analysis. Nature 1991; 352: 427–429.

25. Jeffreys AJ, Allen MJ, Hagelberg E & Sonnberg A. Identification of the skeletal remains of josef mengele by DNA analysis. Forensic Sci. Int. 1992; 56: 65–76.

26. Melez İE. Kan Lekesi Üzerinden Adli Genetiğe Giriş Olay Yerinden Laboratuvara. (Nobel Tıp Kitabevleri) 2013.

27. Lee HC, Ladd C, Bourke MT, Pagliaro E & Tirnady F. DNA typing in forensic science. I. Theory and background. Am. J. Forensic Med. Pathol. 1994; 15: 269–82.

28. Balazs I. Properties of hypervariable single locus polymorphisms and their application to identity testing. in DNA In Forensic Science Theory, Techniques And Applications (ed. James R. Robertson, A. M. Ross, L. B.) 1990; 112–124 (Ellis Horwood Limited).

29. Glover KA et al. A comparison of SNP and STR loci for delineating population structure and performing individual genetic assignment. BMC Genet. 11, 2, 2010.

30. Serin A, Alper B ve Dag H. No Title. Adli Tıp Derg. 2002; 16:72–81.

31. Ruitberg CM. STRBase: a short tandem repeat DNA database for the human identity testing community. Nucleic Acids Res. 2001; 29: 320–322.

32. Lygo JE et al. The validation of short tandem repeat (STR) loci for use in forensic casework. Int. J.

Legal Med. 1994; 107: 77–89.

33. Semizoğlu İ. Adli DNA Analizleri. (Adalet Yayınevi) 2013.

34. Gettings KB, Aponte RA, Vallone PM & Butler JM. STR allele sequence variation: Current knowledge and future issues. Forensic Sci. Int. Genet. 2015; 18: 118–130.

35. Urquhart A, Kimpton CP, Downes TJ & Gill P. Variation in Short Tandem Repeat sequences ?a survey of twelve microsatellite loci for use as forensic identification markers. Int. J. Legal Med. 1994; 107: 13–20.

36. Butler JM & Hill CR. Biology and Genetics of New Autosomal STR Loci Useful for Forensic DNA Analysis. Forensic Sci. Rev. 2012; 24: 15–26.

37. Altun A. Çukurova Yöresinde HUMVWA Lokusu Allel Frekans Dağılımı. (Çukurova Üniversitesi) 1999.

38. Aşçıoğlu F. X-Kromozomal STR Polimorfizmi (DXS8377, DXS101, DXS6789, STRX-1, HUMHPRTB) ve Türk Toplumundaki Alel Frekansları. (İstanbul Üniversitesi) 2006.

39. Edelmann J, Deichsel D, Hering S, Plate I & Szibor R. Sequence variation and allele nomenclature for the X-linked STRs DXS9895, DXS8378, DXS7132, DXS6800, DXS7133, GATA172D05, DXS7423 and DXS8377. Forensic Sci. Int. 2002; 129: 99–103.

40. Urquhart A, Oldroyd NJ, Kimpton CP & Gill P. Highly discriminating heptaplex short tandem repeat PCR system for forensic identification. Biotechniques 1995; 18: 116–8, 120–1.

41. Sparkes R et al. The validation of a 7-locus multiplex STR test for use in forensic casework. (I). Mixtures, ageing, degradation and species studies. Int. J. Legal Med. 1996; 109: 186–94.

42. Sparkes R et al. The validation of a 7-locus multiplex STR test for use in forensic casework. (II), Artefacts, casework studies and success rates. Int. J. Legal Med. 1996; 109: 195–204.

43. Jin L, Macaubas C, Hallmayer J, Kimura A & Mignot E. Mutation rate varies among alleles at a microsatellite locus: Phylogenetic evidence. Proc. Natl. Acad. Sci. 1996; 93: 15285–15288.

44. Brinkmann B, Klintschar M, Neuhuber F, Hühne J & Rolf B. Mutation Rate in Human Microsatellites: Influence of the Structure and Length of the Tandem Repeat. Am. J. Hum. Genet. 1998; 62: 1408–1415.

45. Möller A et al. Population data and forensic efficiency values for the STR systems HumVWA, HumMBP and HumFABP. Int. J. Legal Med. 1994; 106: 183–9.

46. Di Rienzo A et al. Mutational processes of simple-sequence repeat loci in human populations. Proc.

Natl. Acad. Sci. 1994; 91: 3166–3170.

47. Farrall M & Weeks DE. Mutational Mechanisms for Generating Microsatellite Allele-Frequency Distributions: An Analysis of 4,558 Markers. Am. J. Hum. Genet. 1998; 62: 1260–1262.

48. Aşicioglu F, Oguz-Savran F & Ozbek U. Mutation rate at commonly used forensic STR loci: paternity testing experience. Dis. Markers 2004; 20: 313–5.

49. Rubinsztein DC et al. Microsatellite evolution — evidence for directionality and variation in rate between species. Nat. Genet. 1995; 10: 337–343.

50. Henke J & Henke L. Mutation Rate in Human Microsatellites. Am. J. Hum. Genet. 1999; 64: 1473. 51. Rolf B, Wiegand P & Brinkmann B. Somatic mutations at STR loci--a reason for three-allele

pattern and mosaicism. Forensic Sci. Int. 2002; 126: 200–2.

52. Chakraborty R, Stivers DN & Zhong Y. Estimation of mutation rates from parentage exclusion data: applications to STR and VNTR loci. Mutat. Res. Mol. Mech. Mutagen. 1996; 354: 41–48. 53. Ross AM ve Harding HWJ. DNA typing and forensic Science. Forensic Sci. Int. 1989; 41: 197–

203.

54. Hallenberg C & Morling N. A report of the 1997, 1998 and 1999 Paternity Testing Workshops of the English Speaking Working Group of the International Society for Forensic Genetics. Forensic

Sci. Int. 2001; 116: 23–33.

55. Holland MM, Cave CA, Holland CA & Bille TW. Development of a quality, high throughput DNA analysis procedure for skeletal samples to assist with the identification of victims from the World Trade Center attacks. Croat. Med. J. 2003; 44: 264–72.

56. Menotti-Raymond MA, David VA, Wachter LL, Butler JM & O’Brien SJ. An STR forensic typing system for genetic individualization of domestic cat (Felis catus) samples. J. Forensic Sci. 2005; 50: 1061–70.

57. Pádár Z et al. Canine STR analyses in forensic practice. Observation of a possible mutation in a dog hair. Int J Leg. Med 2002; 116: 286–288.

58. Schneider PM et al. Results of collaborative study regarding the standardization of the Y-linked STR system DYS385 by the European DNA Profiling (EDNAP) group. Forensic Sci. Int. 1999; 102: 159–65.

59. Prinz M & Sansone M. Y chromosome-specific short tandem repeats in forensic casework. Croat.

Med. J. 2001; 42: 288–91.

60. Gehrig C, Hochmeister B & Budowle B. Swiss Allele Frequencies and Haplotypes of 7 Y-Specific STRs. J. Forensic Sci. 2000; 45: 14701J.

61. Jobling MA, Pandya A & Tyler-Smith C. The Y chromosome in forensic analysis and paternity testing. Int. J. Legal Med. 1997; 110: 118–24.

62. Kayser M et al. Evaluation of Y-chromosomal STRs: a multicenter study. Int. J. Legal Med. 1997; 110: 125–33, 141–9.

63. Kayser M et al. Characteristics and Frequency of Germline Mutations at Microsatellite Loci from the Human Y Chromosome, as Revealed by Direct Observation in Father/Son Pairs. Am. J. Hum.

Genet. 2000; 66: 1580–1588.

64. Edelmann J, Hering S, Kuhlisch E & Szibor R. Validation of the STR DXS7424 and the linkage situation on the X-chromosome. Forensic Sci. Int. 2002; 125: 217–22.

65. Szibor R, Hering S & Edelmann J. A new Web site compiling forensic chromosome X research is now online. Int. J. Legal Med. 2006; 120: 252–254.

66. Turrina S ve De Leo D. Population genetic comparisons of three X-chromosomal STRs (DXS7172 , DXS7173, GATA 172D05) in North and South Italy. in International Congress Series 2004. 67. Lv M et al. Allele Frequency Distribution of Two X-Chromosomal STR Loci in Han Population in

China. J. Forensic Sci. 2004; 49: 1–2.

68. Bär W et al. DNA recommendations. Further report of the DNA Commission of the ISFH regarding the use of short tandem repeat systems. International Society for Forensic Haemogenetics. Int. J.

69. https://www.ncbi.nlm.nih.gov/projects/genome/guide/human/. Available at: https://www.ncbi.nlm.nih.gov/projects/genome/guide/human/. (Accessed: 30th May 2019)

70. Mi Y & Vanderpuye O. Comparison of Different DNA Extraction Methods for Forensic Samples.

J. Nat. Sci. Res. 2013; 3: 32–39.

71. Sweet D, Lorente M, Valenzuela A, Lorente JA & Alvarez JC. Increasing DNA extraction yield from saliva stains with a modified Chelex method. Forensic Sci. Int. 1996; 83: 167–77.

72. Thormann W, Molteni S, Caslavska J & Schmutz A. Clinical and forensic applications of capillary electrophoresis. Electrophoresis 1994; 15: 3–12.

73. Boehnke M, Arnheim N, Li H & Collins FS. Fine-structure genetic mapping of human chromosomes using the polymerase chain reaction on single sperm: experimental design considerations. Am. J. Hum. Genet. 1989; 45: 21–32.

74. El-Alfy SH & Abd El-Hafez AF. Paternity testing and forensic DNA typing by multiplex STR analysis using ABI PRISM 310 Genetic Analyzer. J. Genet. Eng. Biotechnol. 2012; 10: 101–112. 75. Qiagen N.V. Investigator® Argus X-12 Handbook. 1–84, 2013.

76. Lang Y, Guo F & Niu Q. StatsX v2.0: the interactive graphical software for population statistics on X-STR. Int. J. Legal Med. 2019; 133: 39–44.

77. chrx-str. Available at: chrx-str.org. (Accessed: 11th May 2019)

78. Aronson JD. DNA fingerprinting on trial: the dramatic early history of a new forensic technique.

Endeavour 2005; 29: 126–131.

79. Jobling MA. Curiosity in the genes: the DNA fingerprinting story. Investig. Genet. 4, 20 2013. 80. Budowle B, Baechtel FS, Giusti AM & Monson KL. Applying highly polymorphic variable

number of tandem repeats loci genetic markers to identity testing. Clin. Biochem. 1990; 23: 287– 293.

81. Lareu V et al. Normal and anomalous electrophoretic behavior of polymerase chain reaction-based DNA polymorphisms in polyacrylamide gels. Electrophoresis 1998; 19: 1566–1572.

82. Vural B, Atlioglu E, Kolusayin O, Togan I, Buyukdevrim SOT. Turkish population data on the HLA-DO alpha, LDLR, GYPA, HBGG, D7s8, and GC loci. Int. J. Legal Med. 1998; 111: 43–45 .

83. Budowle B, Moretti TR, Baumstark AL, Defenbaugh DA & Keys KM. Population Data on the Thirteen CODIS Core Short Tandem Repeat Loci in African Americans, U.S. Caucasians, Hispanics, Bahamians, Jamaicans, and Trinidadians. J. Forensic Sci. 1999; 44: 14601J.

84. Birus I, Marcikić M, Lauc D, Dzijan S & Lauc G. How high should paternity index be for reliable identification of war victims by DNA typing? Croat. Med. J. 2003; 44: 322–6 .

85. Prontera P, Ottaviani V, Isidori I, Stangoni G & Donti E. Xq12-q13.3 duplication: Evidence of a recurrent syndrome. Ann. Neurol. 2012; 72: 821–822.

86. Mršić G et al. Expanded Croatian 12 X-STR loci database with an overview of anomalous profiles.

ÖZGEÇMİŞ

Adı Soyadı : Esen KALAOĞLU

Doğum Tarihi ve Yeri : 21.02.1984, Adana

Medeni Durumu : Bekar

Adres : Huzurevleri Mah. 77051 Sk. Dış Kapı No:12 Erciyes

Suit Apt. Kat:4, Daire:13 Çukurova/Adana

Telefon : 0 507 787 80 60

E posta: kalaoglu_esen@hotmail.com

Mezun Olduğu Tıp Fakültesi : Gaziantep Üniversitesi Tıp Fakültesi Görev Yerleri: Midyat 1 Nolu Sağlık Ocağı, Midyat/Mardin

Midyat 9 Nolu Kayalıpınar ASM, Midyat/Mardin Midyat 8 Nolu Çavuşlu ASM, Midyat/Mardin

Çukurova Üniversitesi Tıp Fakültesi Adli Tıp Anabilim Dalı, Adana

Dernek Üyelikleri: Adana Tabip Odası

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